E-MEXP-1565 - Transcription profiling of rat mixed-tissue RNA samples over 8.5 months to monitor processing drift

Status
Submitted on 4 April 2008, released on 16 April 2008, last updated on 2 May 2014
Organism
Rattus norvegicus
Samples (1)
Array (1)
Protocols (6)
Description
Process drift at one site was monitored by assaying the rat Mixed Tissue RNA Reference Material (see E-TABM-16) multiple times a week for 8.5 months.
Experiment types
transcription profiling by array, co-expression, optimization, quality control testing
Contact
Citation
Use of diagnostic accuracy as a metric for evaluating laboratory proficiency with microarray assays using mixed-tissue RNA reference samples. Pine PS, Boedigheimer M, Rosenzweig BA, Turpaz Y, He YD, Delenstarr G, Ganter B, Jarnagin K, Jones WD, Reid LH, Thompson KL. Pharmacogenomics 9(11):1753-63 (2008)
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-1565.idf.txt
Sample and data relationshipE-MEXP-1565.sdrf.txt
Raw data (2)E-MEXP-1565.raw.1.zip, E-MEXP-1565.raw.2.zip
Array designA-AFFY-43.adf.txt
R ExpressionSetE-MEXP-1565.eSet.r
Links