E-MEXP-1097 - Transcription profiling of all major organ systems of Medicago truncatula to create a gene expression atlas

Status
Submitted on 7 May 2007, released on 15 March 2008, last updated on 2 May 2014
Organism
Medicago truncatula
Samples (54)
Array (1)
Protocols (11)
Description
Medicago truncatula, which has a relatively small diploid genome, has been adopted as a model species for legume genomics. To enhance its value as a model, we have generated a gene expression atlas that provides a global view of gene expression in all major organ systems of this species, with special emphasis on nodule and seed development.
Experiment types
transcription profiling by array, co-expression, development or differentiation, in vivo, organism part comparison, time series
Contact
Citation
A gene expression atlas of the model legume Medicago truncatula. Benedito VA, Torres-Jerez I, Murray J, Andriankaja A, Allen S, Kakar K, Wandrey M, Verdier J, Zuber H, Ott T, Moreau S, Niebel A, Frickey T, Weiller G, He J, Dai X, Zhao P, Tang Y, Udvardi M. Plant J  (2008)
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-1097.idf.txt
Sample and data relationshipE-MEXP-1097.sdrf.txt
Raw data (2)E-MEXP-1097.raw.1.zip, E-MEXP-1097.raw.2.zip
Processed data (1)E-MEXP-1097.processed.1.zip
Array designA-AFFY-71.adf.txt
R ExpressionSetE-MEXP-1097.eSet.r
Links