E-MEXP-1092 - Transcription profiling of Medicago truncatula cell suspension treated with yeast elicitor or methyl jasminate for 2 or 24 hrs to compare early and late responses

Status
Submitted on 26 April 2007, released on 15 May 2007, last updated on 2 May 2014
Organism
Medicago truncatula
Samples (16)
Array (1)
Protocols (9)
Description
Cell suspensions were treated with yeast elicitor (pathogen) or methyl jasmonate (wounding signal) and harvested at 2 and 24 hour time points in order to compare the transcriptomics between them in early and late response.
Experiment types
transcription profiling by array, co-expression, in vitro, pathogenicity, time series
Contact
Citation
Genomic and Coexpression Analyses Predict Multiple Genes Involved in Triterpene Saponin Biosynthesis in Medicago truncatula. Naoumkina, Marina A.; Modolo, Luzia V.; Huhman, David V.; Urbanczyk-Wochniak, Ewa; Tang, Yuhong; Sumner, Lloyd W.; Dixon, Richard A. Plant Cell 22(3):850 (2010), Europe PMC 20348429
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-1092.idf.txt
Sample and data relationshipE-MEXP-1092.sdrf.txt
Raw data (1)E-MEXP-1092.raw.1.zip
Processed data (1)E-MEXP-1092.processed.1.zip
Array designA-AFFY-71.adf.txt
R ExpressionSetE-MEXP-1092.eSet.r
Links