E-GEOD-8360 - Transcription profiling of mouse developing kidney (GUDMAP Series_id: 18)

Status
Submitted on 3 July 2007, released on 16 June 2008, last updated on 10 June 2011
Organism
Mus musculus
Samples (4)
Array (1)
Protocols (5)
Description
The long term objective is to create an encyclopedia of the expression levels of all genes in multiple components of the developing kidney. The central thesis is straightforward. The combination of laser capture microdissection (LCM) plus microarray analysis offers a powerful, efficient and effective method for the creation of a global gene expression atlas of the developing kidney. Microarrays with essentially complete genome coverage can be used to quantitate expression levels of every gene in laser capture microdissected components of the developing kidney. The ensuing rapid read-out provides an expression atlas that is more sensitive, more economical and more complete than would be possible by in situ hybridizations alone. Experiment Overall Design: At different developmental time points we isolate discrete elements of the kidney by using laser capture microdissection and then define their gene expression profiles with microarrays.
Experiment types
transcription profiling by array, unknown experiment type
Contact
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-8360.idf.txt
Sample and data relationshipE-GEOD-8360.sdrf.txt
Raw data (1)E-GEOD-8360.raw.1.zip
Processed data (1)E-GEOD-8360.processed.1.zip
Array designA-AFFY-45.adf.txt
R ExpressionSetE-GEOD-8360.eSet.r
Links