E-GEOD-6581 - Transcription profiling of mouse mammary gland from

Status
Submitted on 20 December 2006, released on 14 June 2008, last updated on 10 June 2011
Organism
Mus musculus
Samples (3)
Array (1)
Protocols (6)
Description
The aim of our work was the comparison of human and mouse gene expression data and to identify a conserved breast tumor gene set. The results encourage the usefulness of transgenic mice as a model for human breast cancer formation and therapy. Experiment Overall Design: The aim of our work was to establish a database for breast cancer gene expression data in order to compare human and mouse breast cancer. We identified human and mouse homologues genes and compared the expression profile of 24 human breast tumors with six WAP-SVT/t breast tumors (WAP-SVT/t animals, line 8). Our studies confirmed the heterogeneity in gene expression of human as well as mouse breast cancer cells. However, 63 genes were found to be differentially expressed (upregulated: 40; downregulated: 23 genes) in at least 75% of the breast tumors of both species.
Experiment types
transcription profiling by array, unknown experiment type
Contact
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-6581.idf.txt
Sample and data relationshipE-GEOD-6581.sdrf.txt
Raw data (1)E-GEOD-6581.raw.1.zip
Processed data (1)E-GEOD-6581.processed.1.zip
Array designA-AFFY-36.adf.txt
R ExpressionSetE-GEOD-6581.eSet.r
Links