E-GEOD-6453 - Transcription profiling of mammary glands of mice at different age to carry out global analysis of gene expression changes occurring in the normal pubertal mouse mammary gland development

Status
Submitted on 5 December 2006, released on 27 November 2007, last updated on 27 March 2012
Organism
Mus musculus
Samples (14)
Array (1)
Protocols (5)
Description
The aim was to carry out global analysis of gene expression changes occurring in the normal pubertal mouse mammary gland from the appearance to the regression of terminal end buds. Experiment Overall Design: 5 time points were chosen for analysis: 3wk, 4wk, 5wk, 6wk and 7wk. Each time point was analysed in triplicate with the exception of the 5wk time point which was analysed in duplicate. Total: 14 samples. Each sample was prepared from a pool of RNA from mammary glands of a minimum of three mice.
Experiment types
transcription profiling by array, co-expression, development or differentiation
Contact
Citation
ERalpha-CITED1 co-regulated genes expressed during pubertal mammary gland development: implications for breast cancer prognosis. J McBryan, J Howlin, P A Kenny, T Shioda, F Martin. Oncogene 26(44):6406-19 (2007)
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-6453.idf.txt
Sample and data relationshipE-GEOD-6453.sdrf.txt
Raw data (1)E-GEOD-6453.raw.1.zip
Processed data (1)E-GEOD-6453.processed.1.zip
Array designA-AFFY-36.adf.txt
R ExpressionSetE-GEOD-6453.eSet.r
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