E-GEOD-5743 - Transcription profiling by array of Arabidopsis after treatment with 2,4-dichlorophenoxy acetic acid

Status
Released on 14 June 2008, last updated on 13 January 2012
Organism
Arabidopsis thaliana
Samples (3)
Array (1)
Protocols (4)
Description
This experiment was annotated by TAIR (http://www.arabidopsis.org). In this experiment we examined whole genome response to herbicidal levels of 2,4-D application. Arabidopsis plants (14 days) grown in vitro on MS medium in petri dishes were flooded with 1 mL stock of 2,4-D to enable root uptake. Plants were treated with 1.0 mM 2,4-D for a period of 1 hour immediately after which RNA was extracted and used for the microarray based experiments. the goal of this study was to explore the herbicidal mode of action of auxinic herbicide 2,4-D. Experimenter name = Chitra Raghavan; Experimenter department = Trevor Stevenson Laboratory; Experimenter institute = IRRI; Experimenter address = Entomology and Plant Pathology Division IRRI; Experimenter zip/postal_code = Manila 4031; Experimenter country = Philippines Experiment Overall Design: 3 samples were used in this experiment
Experiment types
transcription profiling by array, unknown experiment type
Contact
Citation
The RST and PARP-like domain containing SRO protein family: analysis of protein structure, function and conservation in land plants. Jaspers P, Overmyer K, Wrzaczek M, Vainonen JP, Blomster T, Salojärvi J, Reddy RA, Kangasjärvi J. BMC Genomics 11:170 (2010), Europe PMC 20226034
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-5743.idf.txt
Sample and data relationshipE-GEOD-5743.sdrf.txt
Raw data (1)E-GEOD-5743.raw.1.zip
Processed data (1)E-GEOD-5743.processed.1.zip
Array designA-AFFY-2.adf.txt
Links