E-GEOD-56248 - A Smooth Muscle-Like Origin for Beige Adipocytes

Status
Released on 4 April 2014, last updated on 13 August 2014
Organism
Mus musculus
Samples (8)
Protocols (3)
Description
A comparison of the translating RNAs in UCP1-positive cells from the classical BAT, the inguinal WAT, and the perigonadal WAT. We find genes common to all UCP1-positive cells independent of anatomical location, as well as genes specifically enriched in one group versus the others. Results provide a portrait of gene expression in UCP1-positive cells in vivo. Translating RNAs in UCP1-positive cells were purified from 6 week old female UCP1-TRAP mice after 2 weeks at 4 degC. N=3 for iWAT, N=2 for pgWAT, and N=3 for BAT.
Experiment type
RNA-seq of coding RNA 
Contacts
Bruce M Spiegelman, Jonathan Z Long
Citation
A smooth muscle-like origin for beige adipocytes. Long JZ, Svensson KJ, Tsai L, Zeng X, Roh HC, Kong X, Rao RR, Lou J, Lokurkar I, Baur W, Castellot JJ Jr, Rosen ED, Spiegelman BM. , Europe PMC 24709624
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
Files
Investigation descriptionE-GEOD-56248.idf.txt
Sample and data relationshipE-GEOD-56248.sdrf.txt
Processed data (1)E-GEOD-56248.processed.1.zip
Links