E-GEOD-52872 - miRNA expression signatures in heart tissues of mice simulating posttraumatic stress disorder (PTSD) [Study2]

Status
Released on 4 December 2013, last updated on 3 June 2014
Organism
Mus musculus
Samples (16)
Array (1)
Protocols (6)
Description
Using a PTSD mouse model, we investigated the longitudinal transcriptomic changes in heart tissues after the exposure to stress through intimidation We designed our time-course study (Study II) with three experimental conditions where we varied the length of time that subservient mice were exposed to aggressor mice with the same length of rest time after the exposure (1day). The conditions included were 1day-exposure (T1R1), 2day-exposure (T2R1) and 3day-exposure (T3R1). We designed our initial study (Study I) with four experimental conditions where we varied the length of time that subservient mice were exposed to aggressor mice and the length of rest time after the exposure. The conditions included were short exposure-short rest (T5R1-T indicates the number of days of trauma exposure; R indicates the number of days of rest after exposure), short exposure-long rest (T5R10), long exposure-short rest (T10R1) and long exposure-long rest (T10R42)
Experiment type
transcription profiling by array 
Contacts
Ji-Hoon Cho <jcho@systemsbiology.org>, Aarti Gautam, Alena Kulchenko, Alton Etheridge, David Baxter, David J Galas, Inyoul Lee, Kai Wang, Kelsey Scherler, Leroy Hood, Marti Jett, Nabarun Chakraborty, Rasha Hammamieh, Sara McClarty, Seid Muhie, Yue Yuan
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-52872.idf.txt
Sample and data relationshipE-GEOD-52872.sdrf.txt
Processed data (1)E-GEOD-52872.processed.1.zip
Array designA-GEOD-11434.adf.txt
Links