E-GEOD-52308 - Expression data from H358

Status
Released on 1 January 2014, last updated on 13 January 2014
Organism
Homo sapiens
Samples (6)
Array (1)
Protocols (7)
Description
Tumors that show evidence of epithelial to mesenchymal transition (EMT) have been associated with metastasis, drug resistance, and poor prognosis. EMT may alter the molecular requirements for growth and survival in different contexts, but the underlying mechanisms remain incomplete. Given the heterogeneity along the EMT spectrum between and within tumors it is important to define the requirements for growth and survival in cells with an epithelial or mesenchymal phenotype to maximize therapeutic efficacy. We have established an inducible cell line model in which a tamoxifen regulatable Twist-ER fusion protein is stably expressed in the H358 non-small cell lung cancer cell line. Upon tamoxifen addition, cells undergo EMT and provide a system in which we can compare the growth and survival requirements directly related to EMT, removing confounding factors present when comparing different cell lines. H358 cells stably expressing either GFP or TwistER were treated for 12 days in culture with 100nM 4-hydroxytamoxifen followed by RNA isolation. Three biological replicates of each condition were collected.
Experiment type
transcription profiling by array 
Contacts
Megan Salt <geo@ncbi.nlm.nih.gov>, Frank McCormick, Megan B Salt, Sourav Bandyopadhyay
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-52308.idf.txt
Sample and data relationshipE-GEOD-52308.sdrf.txt
Raw data (1)E-GEOD-52308.raw.1.zip
Processed data (1)E-GEOD-52308.processed.1.zip
Array designA-AFFY-141.adf.txt
Links