E-GEOD-51758 - Genome-wide profiling of DNA methylation and expression identifies CIMP in myelodysplastic syndrome [Illumina]

Status
Released on 29 October 2013, last updated on 4 November 2013
Organism
Homo sapiens
Samples (8)
Array (1)
Protocols (5)
Description
To identify genes hypermethylated and transcriptionally downregulated, we have employed the Illumina Infinium HumanMethylation450 BeadChip and Agilent SurePrint G3 Human Gene Expression 8x60K. And we validated selected genes in cases and controls. eventually we estalished CIMP of MDS. Bisulphite converted DNA from the 4 patients and 4 controls were hybridised to the Illumina Infinium 450k Human Methylation Beadchip
Experiment type
methylation profiling by array 
Contacts
xiaoqin wang <wangxiaoqin@hotmail.com>, Feng Yang, Meixia Liu, Rong Fan, Shaoxu Ying, Shuang Li, Xiaodong Jia, Xiaoli Zhao, Xiaoqin Wang
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-51758.idf.txt
Sample and data relationshipE-GEOD-51758.sdrf.txt
Processed data (1)E-GEOD-51758.processed.1.zip
Additional data (1)E-GEOD-51758.additional.1.zip
Array designA-GEOD-13534.adf.txt
Links