E-GEOD-50990 - Intronic Non-CG DNA Hydroxymethylation and Alternative mRNA Splicing in Honey Bees

Status
Released on 19 September 2013, last updated on 2 May 2014
Organism
Apis mellifera, Apis mellifera scutellata
Samples (8)
Protocols (6)
Description
Honey bee non-CG DNA hydroxymethylation is enriched in the introns, which supplements previous findings that honey bee CG DNA methylation is enriched in exons. Bisulfite sequencing combined with Pvu-Seq to distinguish 5-methylcytosine from 5-hydroxymethylcytosine and RNA-Seq
Experiment types
methylation profiling by high throughput sequencing, RNA-seq of coding RNA 
Contacts
Aliccia Bollig-Fischer, Alya’a Sammak, Chieh-Chun Chen, Douglas M Ruden, Gene E Robinson, Mark D Garfinkel, Matthew E Hudson, Melissa Coon, Pablo Cingolani, Radhika Khetani, Sheng Zhong, Susan Land, Xiaoyi Cao, Yun Huang
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
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