E-GEOD-5090 - Transcription profiling by array of human adipose tissue from patients with polycystic ovary syndrome.

Status
Released on 26 October 2007, last updated on 30 October 2013
Organism
Homo sapiens
Samples (17)
Array (1)
Protocols (2)
Description
CONTEXT: The polycystic ovary syndrome (PCOS) is frequently associated with visceral obesity, suggesting that omental adipose tissue might play an important role in the pathogenesis of the syndrome. OBJECTIVE: The objective was to study the expression profiles of omental fat biopsy samples obtained from morbidly obese women with or without PCOS at the time of bariatric surgery. DESIGN: This was a case-control study. SETTINGS: We conducted the study in an academic hospital. PATIENTS: Eight PCOS patients and seven nonhyperandrogenic women submitted to bariatric surgery because of morbid obesity. INTERVENTIONS: Biopsy samples of omental fat were obtained during bariatric surgery. MAIN OUTCOME MEASURE: The main outcome measure was high-density oligonucleotide arrays. RESULTS: After statistical analysis, we identified changes in the expression patterns of 63 genes between PCOS and control samples. Gene classification was assessed through data mining of Gene Ontology annotations and cluster analysis of dysregulated genes between both groups. These methods highlighted abnormal expression of genes encoding certain components of several biological pathways related to insulin signaling and Wnt signaling, oxidative stress, inflammation, immune function, and lipid metabolism, as well as other genes previously related to PCOS or to the metabolic syndrome. CONCLUSION: The differences in the gene expression profiles in visceral adipose tissue of PCOS patients compared with nonhyperandrogenic women involve multiple genes related to several biological pathways, suggesting that the involvement of abdominal obesity in the pathogenesis of PCOS is more ample than previously thought and is not restricted to the induction of insulin resistance.
Experiment types
transcription profiling by array, disease state design
Contact
Citation
Differential gene expression profile in omental adipose tissue in women with polycystic ovary syndrome. Marta Cortón, José I Botella-Carretero, Alberto Benguría, Gemma Villuendas, Angel Zaballos, José L San Millán, Héctor F Escobar-Morreale, Belén Peral. , Europe PMC 17062763
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-5090.idf.txt
Sample and data relationshipE-GEOD-5090.sdrf.txt
Raw data (1)E-GEOD-5090.raw.1.zip
Processed data (1)E-GEOD-5090.processed.1.zip
Array designA-AFFY-33.adf.txt
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