E-GEOD-50175 - Expression data from human Th1 and Th1Th17 cells

Status
Released on 26 August 2013, last updated on 3 June 2014
Organism
Homo sapiens
Samples (8)
Array (1)
Protocols (6)
Description
We previously demonstrated that Th1Th17 cells are highly permissive to HIV-1, whereas Th1 cells are relatively resistant. Here, we investigated molecular mechanisms underlying these differences. Superior HIV replication in Th1Th17 vs. Th1 cells was regulated by entry and post-entry mechanisms. We used microarrays to detail the gene expression signatures caracterizing Th1 cells from Th1Th17. Primary human Th1 (CXCR3+CCR6- phenotype) and Th1Th17 (CXCR3+CCR6- phenotype) CD4+ T-cells were isolated by flow cytometry from HIV-uninfected, healthy donors. Cells were stimulated via CD3/CD28 for 3 days. The RNA was extracted and hybridized on the GeneChip® Human Genome U133 Plus 2.0 Array (Affymetrix).
Experiment type
transcription profiling by array 
Contacts
Jean-Philippe Goulet <jp.goulet@umontreal.ca>, Annie Bernier, Annie Gosselin, Aurélie Cleret-Buhot, Cécile Tremblay, Jean-Pierre Routy, Mohammad-Ali Jenabian, Patricia Monteiro, Petronela Ancuta, Sandrina DaFonseca, Vanessa S Wacleche
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-50175.idf.txt
Sample and data relationshipE-GEOD-50175.sdrf.txt
Raw data (1)E-GEOD-50175.raw.1.zip
Processed data (1)E-GEOD-50175.processed.1.zip
Array designA-AFFY-44.adf.txt
Links