E-GEOD-49628 - Large-scale hypomethylated blocks associated with Epstein-Barr virus-induced B-cell immortalization [Expression Array]

Status
Released on 17 September 2013, last updated on 3 June 2014
Organism
Homo sapiens
Samples (9)
Array (1)
Protocols (6)
Description
To determine what DNA methylation and gene expression changes occur following EBV transformation. B-cells were isolated from 3 donors. Resting, CD40 activated and EBV transfromed cells from each donor was analyzed. Each sample was assayed using Affymetrix expression arrays and whole genome bisulfite sequenicng. Additional time points during transformation and activation were sequenced as well, but not assayed for expression. B-cells were isolated from 3 donors. Resting, CD40 activated and EBV transfromed cells from each donor was analyzed.
Experiment type
transcription profiling by array 
Contacts
Kasper Daniel Hansen <kasperdanielhansen@gmail.com>, Kasper D Hansen, Sarven Sarbunciyan
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-49628.idf.txt
Sample and data relationshipE-GEOD-49628.sdrf.txt
Raw data (1)E-GEOD-49628.raw.1.zip
Processed data (1)E-GEOD-49628.processed.1.zip
Array designA-AFFY-44.adf.txt
Links