E-GEOD-49035 - De novo sequencing of circulating microRNAs in locally advanced breast cancer

Released on 20 July 2013, last updated on 5 September 2013
Homo sapiens
Samples (42)
Protocols (4)
MicroRNAs (miRNAs) have been recently detected in the circulation of cancer patients, where they are associated with clinical parameters. Discovery profiling of circulating small RNAs has not been previously reported in breast cancer (BC), and was carried out in this study to identify blood-based small RNA markers of BC clinical outcome. The pre-treatment sera of 42 stage II–III locally advanced and inflammatory BC patients who received neoadjuvant chemotherapy (NCT) followed by surgical tumor resection were analyzed for marker identification by deep sequencing all circulating small RNAs.
Experiment type
RNA-seq of non coding RNA 
Emily Wang <emilywang@coh.org>, Shizhen E Wang, Xiwei Wu
Exp. designProtocolsVariablesProcessedSeq. reads
Investigation descriptionE-GEOD-49035.idf.txt
Sample and data relationshipE-GEOD-49035.sdrf.txt
Processed data (1)E-GEOD-49035.processed.1.zip