E-GEOD-4888 - Transcription profiling by array of human endometrium across the menstrual cycle

Status
Released on 25 June 2007, last updated on 5 April 2012
Organism
Homo sapiens
Samples (28)
Array (1)
Protocols (4)
Description
To examine the possibility that biochemical,or molecular signatures of endometrium may prove to be more useful, we have investigated,whole genome molecular phenotyping (54,600 genes/ESTs) of this tissue sampled across the,cycle in 28 normo-ovulatory women, using high-density oligonucleotide microarrays. The results demonstrate,that endometrial samples obtained by two different sampling techniques (biopsy and curetting,hysterectomy specimens) from subjects who are as normal as possible in a human study and,4,including those with unknown histology, can be classified by their molecular signatures and,correspond to known phases of the menstrual cycle with identical results using two independent,analytical methods. Also, the results enable global identification of biological processes and,molecular mechanisms that occur dynamically in the endometrium in the changing steroid,hormone milieu across the menstrual cycle in normo-ovulatory women. The results underscore,the potential of gene expression profiling for developing molecular diagnostics of endometrial,normalcy and abnormalities and identifying molecular targets for therapeutic purposes in,endometrial disorders.
Experiment types
transcription profiling by array, co-expression, organism part comparison
Contact
Citation
Molecular phenotyping of human endometrium distinguishes menstrual cycle phases and underlying biological processes in normo-ovulatory women. S Talbi,A E Hamilton,K C Vo,S Tulac,M T Overgaard,C Dosiou,N Le Shay,C N Nezhat,R Kempson,B A Lessey,N R Nayak,L C Giudice. , Europe PMC 16306079
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-4888.idf.txt
Sample and data relationshipE-GEOD-4888.sdrf.txt
Raw data (2)E-GEOD-4888.raw.1.zip, E-GEOD-4888.raw.2.zip
Array designA-AFFY-44.adf.txt
R ExpressionSetE-GEOD-4888.eSet.r
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