E-GEOD-48804 - Differentially expressed genes after inhibition of methylation

Status
Released on 11 July 2013, last updated on 3 June 2014
Organism
Danio rerio
Samples (11)
Array (1)
Protocols (7)
Description
Expression microarray of livers from 4 dpf control zebrafish larvae, larvae treated with azacytidine, and ahcy mutant larvae Comparison of expression from livers obtained from ahcy+/+ treated with vehicle, ahcy+/+ treated with azacytidine, and ahcy-/- treated with vehicle. We treated larvae starting at 2 dpf with 1 mM azacytidine or vehicle control. Livers were removed at 4 dpf, RNA isolated, and double amplified.
Experiment type
transcription profiling by array 
Contacts
Citation
DNA hypomethylation causes bile duct defects in zebrafish and is a distinguishing feature of infantile biliary atresia. Matthews RP, Eauclaire SF, Mugnier M, Lorent K, Cui S, Ross MM, Zhang Z, Russo P, Pack M. , Europe PMC 21319190
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-48804.idf.txt
Sample and data relationshipE-GEOD-48804.sdrf.txt
Raw data (1)E-GEOD-48804.raw.1.zip
Processed data (1)E-GEOD-48804.processed.1.zip
Array designA-AFFY-38.adf.txt
Links