E-GEOD-47195 - SALT-RESPONSIVE ERF1 expression profiling in rice roots

Status
Released on 17 September 2013, last updated on 3 June 2014
Organism
Oryza sativa
Samples (6)
Array (1)
Protocols (7)
Description
To identify genes that are regulated by SERF1, we performed expression profiling on roots of serf1 and wild-type plants under standard growth conditions. Plants were grown for 4 weeks at (day/night) 26/22°C, 75/70% relative humidity with a day-length of 12 h and a light intensity of 700 µmol m-2 s-1. Seeds of serf1 T-DNA lines and Nipponbare wild type were placed on hydroponic boxes with full-strength Yoshida medium (Yoshida et al., 1971) using styrofoam adaptors. For each genotype 3 biological replicates were seperately isolated and measured.
Experiment type
transcription profiling by array 
Contacts
Jos Schippers <schippers@mpimp-golm.mpg.de>, Bernd Mueller-Roeber, Jos H Schippers, Romy Schmidt
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-47195.idf.txt
Sample and data relationshipE-GEOD-47195.sdrf.txt
Raw data (1)E-GEOD-47195.raw.1.zip
Processed data (1)E-GEOD-47195.processed.1.zip
Array designA-AFFY-126.adf.txt
Links