E-GEOD-46170 - Whole Genome Expression Array in Human T-cell Acute Lymphoblastic Leukemia

Status
Released on 19 April 2013, last updated on 3 June 2014
Organism
Homo sapiens
Samples (38)
Array (1)
Protocols (7)
Description
Childhood T-ALL samples were compared with thymocyte subsets we compared key molecules of wnt signaling pathway in our cohort RNA was isolated from the bone marrow samples of childhood T-ALL patients at the time of diagnosis with a blast count over 90% and hybridized to Affymetrix GeneChip HU-133 Plus.2 .Thymic subsets were sorted by FACS and labeled as DN(CD3,CD4,CD8 neg), DP3poz tot(CD3,CD4,CD8poz), DP3neg(CD3neg,CD4,CD8poz), ISP(Immature single positive), SP4(Single positive CD4), SP8 (Single positive CD8).
Experiment type
transcription profiling by array 
Contacts
ozden hatirnazng <ozdenhatirnaz@yahoo.com>, Ozden Hatirnaz Ng, Ugur Ozbek
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-46170.idf.txt
Sample and data relationshipE-GEOD-46170.sdrf.txt
Raw data (1)E-GEOD-46170.raw.1.zip
Processed data (1)E-GEOD-46170.processed.1.zip
Array designA-AFFY-44.adf.txt
Links