E-GEOD-46002 - The response of Streptococcus pneumoniae to replication stress on the transcriptome of a wild-type strain

Status
Released on 23 April 2013, last updated on 3 June 2014
Organism
Streptococcus pneumoniae D39
Samples (24)
Array (1)
Protocols (7)
Description
The aim of this study is to identify the response of S. pneumoniae to HPUra-induced replication stress on transcriptional level in a wild type strain. Two cultures were compared to each other. One treated with HPUra and one untreated. A dye-swap was included, and both the dye-swap and original labeling were repeated once as a technical replicate. The slide configuration also contained 3 replicate spots for each gene. This makes a total of 4 slides with 3 replicate spots per slide.
Experiment type
transcription profiling by array 
Contacts
Edwin de Jong, Jan-Willem Veening, Jelle Slager, Laetitia Attaiech, Matthijs M Schokker, Morten Kjos
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-46002.idf.txt
Sample and data relationshipE-GEOD-46002.sdrf.txt
Raw data (1)E-GEOD-46002.raw.1.zip
Processed data (1)E-GEOD-46002.processed.1.zip
Array designA-GEOD-11484.adf.txt
Links