E-GEOD-45693 - Genome-wide transcriptional responses of two metal-tolerant symbiotic Mesorhizobium isolates to zinc and cadmium exposure

Status
Released on 2 April 2013, last updated on 9 May 2013
Organism
Mesorhizobium metallidurans STM 2683, Mesorhizobium sp. STM 4661
Samples (6)
Protocols (5)
Description
Mesorhizobium metallidurans STM 2683 and Mesorhizobium sp. strain STM 4661 were isolated from nodules of the metallicolous legume Anthyllis vulneraria from distant mining spoils. They tolerate unusually high zinc and cadmium concentrations as compared to other mesorhizobia. This work aims to study the gene expression profiles associated with zinc or cadmium exposure and to identify genes involved in metal tolerance in these two metallicolous Mesorhizobium strains of interest for mine phytostabilization purposes. Mesorhizobium metallidurans STM 2683 and Mesorhizobium sp. strain STM 4661 with three treatments (control, Zn and Cd).
Experiment type
RNA-seq of coding RNA 
Contacts
geraldine maynaud <geraldine.maynaud@laposte.net>, Antoine Le Quéré, Brigitte Brunel, Damien Mornico, Dany Severac, Elisabeth Navarro, Emeric Dubois, Géraldine Maynaud, Jean C Cleyet-Marel, Maxime Durot
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
Files
Investigation descriptionE-GEOD-45693.idf.txt
Sample and data relationshipE-GEOD-45693.sdrf.txt
Processed data (1)E-GEOD-45693.processed.1.zip
Links