E-GEOD-4560 - RNAi profiling of human Ewings sarcoma A673 Stable-Knockdown

Status
Submitted on 27 March 2006, released on 13 June 2008, last updated on 27 March 2012
Organism
Homo sapiens
Samples (8)
Array (1)
Description
A673 Ewing's sarcoma cells containing either control RNAi retroviral constructs (luc-RNAi), or RNAi retroviral constructs targeting the endogenous EWS/FLI fusion transcript (either EF-2-RNAi or EF-4-RNAi). Experiment Overall Design: Eight samples total. Four luc-RNAi, and four EWS/FLI knockdown constructs (two each of EF-2-RNAi or EF-4-RNAi).
Experiment types
RNAi profiling by array, unknown experiment type
Contact
Stephen Lessnick
Citation
Expression profiling of EWS/FLI identifies NKX2.2 as a critical target gene in Ewing's sarcoma. Richard Smith, Leah A Owen, Deborah J Trem, Jenny S Wong, Jennifer S Whangbo, Todd R Golub, Stephen L Lessnick. Cancer Cell 9(5):405-16 (2006)
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-4560.idf.txt
Sample and data relationshipE-GEOD-4560.sdrf.txt
Processed data (1)E-GEOD-4560.processed.1.zip
Array designA-AFFY-33.adf.txt
Links