E-GEOD-45569 - Spatial Regulation Dominates Gene Function in the Ganglia Chain

Status
Released on 4 December 2013, last updated on 16 January 2014
Organism
Hirudo medicinalis
Samples (12)
Protocols (3)
Description
Spatial regulation analysis across multiple condition comparisons revealed distinct patterns of gene expression. We combined these transcriptome data with spatial CNS data to produce the spatio-transcripto map of the ganglia chain. The Hirudo Medicinalis set of transcripts generated here provides a resource for gene discovery and gene regulation within the nervous system. In addition, the strategy for de novo assembly of transcriptome data presented here may be helpful in other similar transcriptome studies. Examination of 3 different ganglia in 3 different leeches.
Experiment type
RNA-seq of coding RNA 
Contact
Citation
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
Files
Investigation descriptionE-GEOD-45569.idf.txt
Sample and data relationshipE-GEOD-45569.sdrf.txt
Links