E-GEOD-45491 - Expression profiling in palatal mesenchymal cells stimulated with TGF-beta2 in the presence and absence of TGFbRI and Tak1 kinase inhibitors

Status
Released on 27 March 2013, last updated on 3 June 2014
Organism
Mus musculus
Samples (4)
Array (1)
Protocols (8)
Description
TGF-beta signaling in neural crest cells is required for normal craniofacial development. This signaling can be transduced via TGF-beta type I receptors (TGFbRI) using Smad-dependent or Smad independent signaling pathways. We used microarrays to identify TGF-beta-responsive genes that are dependent either on TGFbRI kinase, Tak1 kinase or both. Primary palatal mesenchymal cell cultures were established. Cultured cells were stimulated with TGF-beta2 in the presence or absence of TGFbRI kinase and Tak1 kinase inhibitors. Unstimulated cells were used as controls. Total RNAs were isolated and hybridized on Affymetrix microarrays.
Experiment type
transcription profiling by array 
Contacts
Vesa Matti Kaartinen <vesak@umich.edu>, Kenji Yumote, Penny S Thomas, Vesa Kaartinen
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-45491.idf.txt
Sample and data relationshipE-GEOD-45491.sdrf.txt
Raw data (1)E-GEOD-45491.raw.1.zip
Processed data (1)E-GEOD-45491.processed.1.zip
Array designA-AFFY-45.adf.txt
Links