E-GEOD-45445 - RNA-seq analysis of Salmonella enterica Typhimurium LT2

Status
Released on 26 March 2013, last updated on 4 April 2013
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Samples (8)
Protocols (4)
Description
We performed whole-genome transcriptomic analyses of the Salmonella Typhimimurium genome during glucose-phosphate stress. In particular, we wanted to elucidate the role of the the small RNA SgrS and protein regulator SgrT in the stress response. Wild-type Salmonella cells, mutants of Salmonella either lacking sgrS or lacking SgrS RNA/ SgrT peptide function were subject to glucose-phoshate stress
Experiment type
RNA-seq of coding RNA 
Contacts
Brian Tjaden <geo@ncbi.nlm.nih.gov>, Carin K Vanderpool, Divya Balasubramanian
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
Files
Investigation descriptionE-GEOD-45445.idf.txt
Sample and data relationshipE-GEOD-45445.sdrf.txt
Links