E-GEOD-45443 - RNA-seq analysis of Escherichia coli str. K-12 substr. MG1655

Status
Released on 26 March 2013, last updated on 4 April 2013
Organism
Escherichia coli str. K-12 substr. MG1655
Samples (54)
Protocols (4)
Description
Expression profiles of wild-type and SgrR mutant E. coli strains under aMG and 2-DG-induced stress. Expression profiles of E. coli overexpressing SgrS sRNA. Illumina RNA-Seq of total RNA extracted from wild-type, SgrR/SgrS mutant and SgrS overexpressing E. coli strains grown in different conditions.
Experiment type
RNA-seq of coding RNA 
Contacts
Brian Tjaden <geo@ncbi.nlm.nih.gov>, Carin K Vanderpool, Divya Balasubramanian, Gregory Richards, Maksym Bobrovskyy, Yan Sun
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
Files
Investigation descriptionE-GEOD-45443.idf.txt
Sample and data relationshipE-GEOD-45443.sdrf.txt
Links