E-GEOD-45347 - Expression analysis of Salmonella enterica serovar Typhimurium strain SL1344 with and without plasmid R27

Status
Released on 21 March 2013, last updated on 2 April 2013
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
Samples (24)
Array (1)
Protocols (7)
Description
Investigation of gene expression level changes in Salmonella Typhiumurium SL1344 (R27) compared to the wild-type SL1344 strain when grown at different growth temperatures and growth phases. A 24 microarray study was performed using total RNA recovered from three separate wild-type cultures of SL1344 and three separate cultures of SL1344 (R27) grown to exponential and stationary phase at 25oC and 37oC. Each microarray measured the expression level of 4,527 genes from Salmonella Typhimurium SL1344 chromosome, 103 genes from plasmid pSLT, 100 genes from plasmid pRSF, 14 genes from plasmid pCOL1B and 207 genes from plasmid R27. Seven probes were present per transcript, with two-fold technical redundancy.
Experiment type
transcription profiling by array 
Contacts
Shane Dillon <shanedillon48@yahoo.com>, Antonio Juarez, Sonia Paytubi
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-45347.idf.txt
Sample and data relationshipE-GEOD-45347.sdrf.txt
Raw data (1)E-GEOD-45347.raw.1.zip
Processed data (1)E-GEOD-45347.processed.1.zip
Array designA-GEOD-16849.adf.txt
Links