E-GEOD-45333 - Genome-wide total RNA and MBD-sequencing in HCT116 and DKO cells as a global re-expression model [MBD-Seq]

Status
Released on 1 October 2013, last updated on 25 November 2013
Organism
Homo sapiens
Samples (8)
Protocols (2)
Description
Genome-wide view of the interplay between methylation and RNA expression in this colorectal cancer model was obtained. MBD-sequencing of 8 colorectal cancer cell lines.
Experiment type
methylation profiling by high throughput sequencing 
Contacts
Beatriz Carvalho, Geert Trooskens, Gerrit A Meijer, Joachim De Schrijver, Leander Van Neste, Linda-J W Bosch, Pierre Dehan, Steve Baylin, Wim Van Criekinge
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-45333.idf.txt
Sample and data relationshipE-GEOD-45333.sdrf.txt
Processed data (1)E-GEOD-45333.processed.1.zip
Links