E-GEOD-45273 - To study gene expression by xylose fermenting strains in the presence and absence of furfural

Status
Released on 1 June 2013, last updated on 2 June 2014
Organism
Saccharomyces cerevisiae
Samples (12)
Array (1)
Protocols (5)
Description
The main objective is to develop a strain tolerant to furfural for ethanol production from lignocellulosic hydrolysates. We compare gene expressions among three genetically modified S. cerevisiae (control, TAL-expressing and TAL-ADH expressing strain) under the presence and absence of furfural. Samples for 3 strains (control, TAL-expressing and TAL-ADH expressing strain) were taken after 6h of exposure to furfural. Furfural concentration were 0 and 70 mM. Each samples were duplicated resulting in total of 12 samples.
Experiment type
transcription profiling by array 
Contacts
Akihiko Kondo <geo@ncbi.nlm.nih.gov>, Ku Ismail, Ku Syahidah, Tomohisa Hasunuma, Yumiko Nambu
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-45273.idf.txt
Sample and data relationshipE-GEOD-45273.sdrf.txt
Raw data (1)E-GEOD-45273.raw.1.zip
Processed data (1)E-GEOD-45273.processed.1.zip
Array designA-GEOD-9294.adf.txt
Links