E-GEOD-45217 - Transcript map of Shewanella oneidensis MR-1

Status
Released on 18 March 2013, last updated on 2 June 2014
Organism
Shewanella oneidensis MR-1
Samples (5)
Array (1)
Protocols (14)
Description
High-resolution tiling analysis of the MR-1 transcriptome under diverse growth conditions The conditions include aerobic growth in Luria-Bertani broth (LB), aerobic growth in defined lactate minimal medium, anaerobic growth in defined lactate minimal medium with 20mM dimethyl sulfoxide as the electron acceptor, anaerobic growth in defined lactate minimal medium with 10mM iron (III) citrate as the electron acceptor, 10 minutes post heat shock at 42oC see GSE39468 for tiling data on lactate minimal media Four slides hybridized to mRNA and one “genomic control” array hybridized to genomic DNA
Experiment type
transcription profiling by tiling array 
Contacts
Adam M Deutschbauer, Adam P Arkin, Morgan N Price, Wenjun Shao
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-45217.idf.txt
Sample and data relationshipE-GEOD-45217.sdrf.txt
Raw data (1)E-GEOD-45217.raw.1.zip
Processed data (1)E-GEOD-45217.processed.1.zip
Array designA-GEOD-16797.adf.txt
Links