E-GEOD-44991 - Gene expression profiling of articular cartilage reveals functional pathways and networks of candidate genes for osteochondrosis in pigs

Status
Released on 21 October 2013, last updated on 2 June 2014
Organism
Sus scrofa
Samples (23)
Array (1)
Protocols (5)
Description
Osteochondrosis disorder is characterized by a failure of endochondral ossification of the articular-epiphyseal cartilage and the physeal growth cartilage. The number and identity of relevant genes are unknown. Simultaneously, 24,123 probe-sets were screened, of which 12,292 had present in at least 50% of the samples of either affected or non-affected and were used for further analysed of differential expression. Total RNAs of articular cartilage tissues from affected and non-affected sib-pairs animals were hybridized to Affymetrix Porcine Genome Arrays.
Experiment type
transcription profiling by array 
Contacts
Klaus Wimmers <wimmers@fbn-dummerstorf.de>, Eduard Murani, Noppawan Rangkasenee, Siriluck Ponsuksili
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-44991.idf.txt
Sample and data relationshipE-GEOD-44991.sdrf.txt
Raw data (1)E-GEOD-44991.raw.1.zip
Processed data (1)E-GEOD-44991.processed.1.zip
Array designA-AFFY-75.adf.txt
Links