E-GEOD-44553 - RNA-sequencing technology identifies specific genes expressed in the ICM of mouse embryos

Status
Released on 23 April 2013, last updated on 29 April 2013
Organism
Mus musculus
Samples (2)
Protocols (2)
Description
RNA-seq data from whole mouse embryos at E3.75 (stage where the three cell types: TE, PrE and EPI are well resolved) and from dissected ICMs in order to identify genes expressed specifically in the ICM We used E3.75 whole mouse embryos at the blastocyst stage and immunosurgically dissected ICMs for RNA extraction and sequencing
Experiment type
RNA-seq of coding RNA 
Contacts
Citation
Oct4 switches partnering from Sox2 to Sox17 to reinterpret the enhancer code and specify endoderm. Aksoy I, Jauch R, Chen J, Dyla M, Divakar U, Bogu GK, Teo R, Leng Ng CK, Herath W, Lili S, Hutchins AP, Robson P, Kolatkar PR, Stanton LW. , Europe PMC 23474895
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-44553.idf.txt
Sample and data relationshipE-GEOD-44553.sdrf.txt
Links