E-GEOD-44084 - Expression data from pre-iPSCs with a control, histone methyltransferase or Cbx3 (HP1g) knockdown

Status
Released on 5 June 2013, last updated on 17 June 2013
Organism
Mus musculus
Samples (8)
Array (1)
Protocols (7)
Description
Transition from a partially reprogrammed pre-iPSC state to iPSC state can be achieved by modulating levels of histone modifying enzymes or proteins that can bind to histone modifications We used microarrays to determine the gene expression profile of pre-iPSCs depleted for either 3 histone methyltransferases together or the HP1gamma protein pre-iPSCs were subjected to simultaneous siRNA mediated knockdown of Ehmt1, Ehmt2 and Setdb1- which is the 3XHMT sample that mediate H3k9me2/me3 or Cbx3( HP1gamma) or control siRNA to luciferase
Experiment type
transcription profiling by array 
Contacts
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-44084.idf.txt
Sample and data relationshipE-GEOD-44084.sdrf.txt
Raw data (1)E-GEOD-44084.raw.1.zip
Processed data (1)E-GEOD-44084.processed.1.zip
Array designA-AFFY-45.adf.txt
Links