E-GEOD-43191 - Genome wide-DNA methylation analysis of articular chondrocytes reveals a cluster of osteoarthritic patients (gene expression)

Status
Released on 1 April 2013, last updated on 8 April 2013
Organism
Homo sapiens
Samples (23)
Array (1)
Protocols (6)
Description
The aim of this study is to identify, for the first time, the genome-wide DNA methylation profiles of human articular chondrocytes from OA and healtly cartilage samples. A subsequent validation of methylation profiles were performed in an idependent cohort of OA samples with Affymetrix Hugene 1.1 st array This represents the gene expression component of the study only OA gene expression profiling was performed with Affymetrix Human Gene 1.1 st array was performed in and independent cohort of 23 OA patients
Experiment type
transcription profiling by array 
Contacts
Juan Fernandez Tajes <jfernandezt@udc.es>, Francisco J Blanco, Ignacio Rego-Perez, Juan Fernández-Tajes
Citation
Genome-wide DNA methylation analysis of articular chondrocytes reveals a cluster of osteoarthritic patients. Fern�ndez-Tajes J, Soto-Hermida A, V�zquez-Mosquera ME, Cort�s-Pereira E, Mosquera A, Fern�ndez-Moreno M, Oreiro N, Fern�ndez-L�pez C, Fern�ndez JL, Rego-P�rez I, Blanco FJ. , Europe PMC 23505229
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-43191.idf.txt
Sample and data relationshipE-GEOD-43191.sdrf.txt
Raw data (1)E-GEOD-43191.raw.1.zip
Processed data (1)E-GEOD-43191.processed.1.zip
Array designA-GEOD-11532.adf.txt
Links