E-GEOD-41626 - The rsa3-1 mutation affects global gene expression in Arabidopsis thaliana under salt stress.

Status
Released on 20 April 2013, last updated on 2 June 2014
Organism
Arabidopsis thaliana
Samples (4)
Array (1)
Protocols (7)
Description
Salt stress is one of the most severe environmental conditions which cause huge losses in crop production worldwide. We identified an essential regulator of salt stress RSA3 and used the Affymetrix whole-genome arrays to study the effect of rsa3-1 mutation on global gene expression under salt stress. A set of genes differentially expressed in rsa3-1 under salt stress are identified. Six-day-old seedlings of Arabidopsis thaliana wild type (Columbia gl1 expressing RD29A::LUC transgene) and rsa3-1 mutant seedlings subjected to salt stress at 120 mM NaCl for 24 h were used for total RNA extraction and hybridizations with Affymetrix ATH1 GeneChips. There are two biological replicates per genotype.
Experiment type
transcription profiling by array 
Contacts
Jianhua Zhu <geo@ncbi.nlm.nih.gov>, Jianhua Zhu, Qingmei Guan, Wenbo Li, Yingdian Wang, Zhen-Yu Wang
Citation
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-41626.idf.txt
Sample and data relationshipE-GEOD-41626.sdrf.txt
Raw data (1)E-GEOD-41626.raw.1.zip
Processed data (1)E-GEOD-41626.processed.1.zip
Array designA-AFFY-2.adf.txt
Links