E-GEOD-41419 - Lipoic acid prevents Cr6+ induced cell transformation and the associated genomic dysregulation.

Status
Released on 1 May 2013, last updated on 2 June 2014
Organism
Mus musculus
Samples (3)
Array (1)
Protocols (7)
Description
Investigation of the transcription profile of cells transformed by Cr6+ in vivo was undertaken. The objective was to elucidate genomic changes underlying the mechanism of action of the carcinogenic dose of Cr6+and their prevention using metabolic antioxidant Lipoic acid (LA). Cr6+ was administered intraperitoneally to LPS+TPA challenged Swiss albino mice in host mediated cell transformation assay using peritoneal macrophages in vivo. The cell transforming potential of Cr6+ test doses was validated by gain of anchorage independent growth potential in soft agar and loss of Fc receptor on target cells. LA was administered in equimolar doses. Compared to non-transformed cells, the gene expression profile of transformed cells was found to be dysregulated substantially and in dose dependent manner. Genes showing down regulation were found to be involved in tumour suppression; apoptosis, DNA repair, and cell-cycle. A similar response was noted in the genes pertaining to immune system, morphogenesis, cell-communication, energy-metabolism, and biosynthesis. The co-administration of lipoic acid prevented the transcription dysregulation and cell transformation by Cr6+ in vivo. The influenced pathways seem to be crucial for progression as well as mitigation of Cr toxicity; and their response to LA indicated their critical role in mechanism of anti-carcinogenic action of LA. Results are of importance to mitigate Cr6+ induced occupational cancer hazard. Agilent one-color experiment, Organism: Mus musculus, Agilent-Whole Genome Mouse 4x44k (AMADID: 14868), Labeling kit: Agilent Quick-Amp labeling Kit (p/n5190-0442)
Experiment type
transcription profiling by array 
Contacts
Dr Sushil Kumar <bajn2005@gmail.com>, Akanksha Nigam, Sushil kumar
Citation
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-41419.idf.txt
Sample and data relationshipE-GEOD-41419.sdrf.txt
Raw data (1)E-GEOD-41419.raw.1.zip
Processed data (1)E-GEOD-41419.processed.1.zip
Array designA-MEXP-724.adf.txt
Links