E-GEOD-40435 - Integrative genome-wide gene expression profiling of clear cell renal cell carcinoma in Czech Republic

Status
Released on 3 June 2013, last updated on 2 June 2014
Organism
Homo sapiens
Samples (202)
Array (1)
Protocols (5)
Description
We conducted whole-genome expression profiling on 101 pairs of ccRCC tumours and adjacent non-tumour renal tissue from Czech patients using the Illumina HumanHT-12 v4 Expression BeadChips to explore the molecular variations underlying the biological and clinical heterogeneity of ccRCC. Total RNA obtained from frozen ccRCC tumour and adjacent non-tumour renal tissue.
Experiment type
transcription profiling by array 
Contacts
Magdalena Barbara Wozniak <geo@ncbi.nlm.nih.gov>, Ghislaine Scelo, Magdalena Wozniak
Citation
Integrative genome-wide gene expression profiling of clear cell renal cell carcinoma in Czech Republic and in the United States. Wozniak MB, Le Calvez-Kelm F, Abedi-Ardekani B, Byrnes G, Durand G, Carreira C, Michelon J, Janout V, Holcatova I, Foretova L, Brisuda A, Lesueur F, McKay J, Brennan P, Scelo G. , Europe PMC 23526956
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-40435.idf.txt
Sample and data relationshipE-GEOD-40435.sdrf.txt
Processed data (1)E-GEOD-40435.processed.1.zip
Array designA-GEOD-10558.adf.txt
Links