E-GEOD-40385 - Overexpression of SChLAP1 versus LACZ in RWPE cells

Status
Released on 20 July 2013, last updated on 2 June 2014
Organism
Homo sapiens
Samples (8)
Array (1)
Protocols (7)
Description
SChLAP1 is a novel long non-coding RNA expressed in prostate cancer. Here we performed transcriptional profiling of the benign immortalized prostate cell line RWPE overexpressing two isoforms of the SChLAP-1 lncRNA compared with RWPE overexpressing LACZ. Our goal was to determine the effect of SChLAP1 overexpression on gene expression in prostate cells. Two-condition experiment: RWPE overexpressing SChLAP1 versus RWPE overexpressing LACZ. Biological replicates: 1 control replicate, 2 experimental replicates. Technical replicates: 2 replicates per SChLAP1 isoform. Cell lines: RWPE.
Experiment type
transcription profiling by array 
Contacts
Matthew Iyer <mkiyer@med.umich.edu>, John R Prensner, Matthew K Iyer, Xiaojung Jing
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-40385.idf.txt
Sample and data relationshipE-GEOD-40385.sdrf.txt
Raw data (1)E-GEOD-40385.raw.1.zip
Processed data (1)E-GEOD-40385.processed.1.zip
Array designA-AGIL-28.adf.txt
Links