E-GEOD-39959 - DNA methylomes of the fire ant Solenopsis invicta.

Status
Released on 27 March 2013, last updated on 4 April 2013
Organism
Solenopsis invicta
Samples (4)
Protocols (2)
Description
We used whole bodies of four different adult fire ant morphs (alate queens, workers, haploid males, and diploid males) from a single polygyne colony to generate single-base resolution DNA methylation maps. DNA was extracted from whole bodies of individual males, individual queens, and pooled workers. Bisulfite conversion and sequencing was performed by Beijing Genomics Institute (Shenzhen, China). Unmethylated enterobacteria phage lambda DNA (GenBank accession: J02459.1) was added to each genomic DNA sample as a control for bisulfite conversion efficiency.
Experiment type
methylation profiling by high throughput sequencing 
Contacts
Brendan Hunt <brendan.hunt@gatech.edu>, Brendan G Hunt, Karl M Glastad, Michael A Goodisman, Soojin V Yi
Citation
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
Files
Investigation descriptionE-GEOD-39959.idf.txt
Sample and data relationshipE-GEOD-39959.sdrf.txt
Links