E-GEOD-39906 - Effect of OsHRZ knockdown in rice roots under iron sufficiency and deficiency

Status
Released on 17 October 2013, last updated on 2 June 2014
Organism
Oryza sativa
Samples (18)
Array (1)
Protocols (7)
Description
Transcriptional profiling of rice genes analyzing the effect of knockdown of OsHRZ1 and OsHRZ2 in HRZ2i lines. NT and HRZ2i lines 1, 2 and 3 (2i-1, 2i-2 and 2i-3, respectively) were treated under iron sufficiency for 7 days (+Fe 7d) or under iron deficiency for 1 day (-Fe 1d) or 7 days (-Fe 7d) in hydroponic culture. Comparison between NT and HRZ2i lines at +Fe 7d, -Fe 1d and -Fe 7d. Biological replicates: 2-3 NT replicates, 3 HRZ2i replicates (one each for 2i-1, 2i-2 and 2i-3) for each treatment.
Experiment type
transcription profiling by array 
Contacts
Naoko K Nishizawa, Takanori Kobayashi
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-39906.idf.txt
Sample and data relationshipE-GEOD-39906.sdrf.txt
Raw data (1)E-GEOD-39906.raw.1.zip
Processed data (1)E-GEOD-39906.processed.1.zip
Array designA-GEOD-6864.adf.txt
Links