E-GEOD-39526 - Identification of microarray probe signals constantly present in multiple sample types (part 1)

Status
Released on 10 June 2013, last updated on 2 June 2014
Organism
Homo sapiens
Samples (6)
Array (1)
Protocols (11)
Description
The correlation of the RNA profiles obtained by microarray analysis was compared with that obtained from RNA-Seq by using reduced complexity sperm datasets. This resolved as a series of discordant probes. The extent of discordancy among other datasets was then determined. A correlative study between probe’s signal intensity from Illumina bead arrays with its transcript level detected by next generation sequencing technique was performed. RNAs from sperm and testis samples were applied
Experiment type
transcription profiling by array 
Contacts
Stephen Krawetz <steve@compbio.med.wayne.edu>, Aletheia C Lima-Souza, Robert J Goodrich, Shihong Mao, Stephen A Krawetz
Citation
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-39526.idf.txt
Sample and data relationshipE-GEOD-39526.sdrf.txt
Processed data (1)E-GEOD-39526.processed.1.zip
Array designA-GEOD-10558.adf.txt
Links