E-GEOD-38991 - Genome-wide DNA methylation maps of Arabidopsis thaliana in two seasons

Status
Released on 21 July 2013, last updated on 2 May 2014
Organism
Arabidopsis thaliana
Samples (4)
Protocols (3)
Description
DNA methylation is involved in many biological processes during plant growth and development. Here, we report a novel annual growth rhythm that is found in cotton plants grown in different time-of-year. To further study this rhythm in other plants, we use Arabidopsis thaliana for genome-wide bisulfite sequencing. Two A. thaliana DNA samples were extracted from 20 days old whole plant in Feburary and August for bisulphite treatment and further Illumina sequencing.
Experiment type
methylation profiling by high throughput sequencing 
Contacts
Yu-Xian Zhu <zhuyx@water.pku.edu.cn>, Fangxing Jia, Qin Li, Xiang Jin, Yuxian Zhu
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-38991.idf.txt
Sample and data relationshipE-GEOD-38991.sdrf.txt
Additional data (2)E-GEOD-38991.additional.1.zip, E-GEOD-38991.additional.2.zip
Links