E-GEOD-38737 - Genome-wide expression profiling analysis of a SMC6 mutant mouse model

Status
Released on 22 April 2013, last updated on 2 June 2014
Organism
Mus musculus
Samples (24)
Array (1)
Protocols (5)
Description
The function of the SMC5-6 complex is less clear, but it has an important role in a variety of different DNA repair processes and in resolving recombination structures. Interestingly mutation at a highly conserved residue (Ser994) in the ATP hydrolysis motif in the SMC6 C-terminal domain, resulted in mice with a mild phenotype. Total RNA obtained from homozygote 4 male mutant mice was compared to 2-4 wild type or 2 heterozygote controls.
Experiment type
transcription profiling by array 
Contacts
Citation
SMC6 is an essential gene in mice, but a hypomorphic mutant in the ATPase domain has a mild phenotype with a range of subtle abnormalities. Ju L, Wing J, Taylor E, Brandt R, Slijepcevic P, Horsch M, Rathkolb B, R�cz I, Becker L, Hans W, Adler T, Beckers J, Rozman J, Klingenspor M, Wolf E, Zimmer A, Klopstock T, Busch DH, Gailus-Durner V, Fuchs H, Angelis MH, van der Horst G, Lehmann AR. , Europe PMC 23518413
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-38737.idf.txt
Sample and data relationshipE-GEOD-38737.sdrf.txt
Processed data (1)E-GEOD-38737.processed.1.zip
Array designA-MEXP-1174.adf.txt
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