E-GEOD-37640 - Gene expression profile of TARDBP in hepatocellular carcinoma cell line (SK-Hep1)

Status
Released on 22 April 2013, last updated on 2 June 2014
Organism
Homo sapiens
Samples (6)
Array (1)
Protocols (5)
Description
TARDBP is TARDBP (TDP-43) is a DNA/RNA binding protein and was mutated in human amyotrophic lateral sclerosis (ALS). However, its function in human cancer has not been fully identified, yet.Thus, We carried out microarray to investigate the down-stream target genes of TARDBP after silencing TARDBP in liver cancer cell SK-Hep1. To identify the role of TARDBP in hepatocellular carcinoma cell line, we performed microarray after knocking down TARDBP in hepatocellular carcinoma cell line (3 siLuc, 3 siTARDBP)
Experiment type
transcription profiling by array 
Contacts
Yun-Yong Park <yypark@mdanderson.org>, Ju-seog Lee, Sang B Kim
Citation
TARDBP regulates glycolysis in hepatocellular carcinomaby regulating PFKP through miR-520. Park YY, Kim SB, Han HD, Sohn BH, Kim JH, Liang J, Lu Y, Mills GB, Sood AK, Lee JS. , Europe PMC 23389994
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-37640.idf.txt
Sample and data relationshipE-GEOD-37640.sdrf.txt
Processed data (1)E-GEOD-37640.processed.1.zip
Array designA-GEOD-10558.adf.txt
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