E-GEOD-36789 - Transcriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis

Status
Released on 19 September 2012, last updated on 11 March 2013
Organism
Arabidopsis thaliana
Samples (18)
Array (1)
Protocols (8)
Description
The functions of miRNAs and their target mRNAs in Arabidopsis development have been widely documented, however, roles of stress responsive miRNAs and their targets are not as well understood. Using small RNA deep sequencing and ATH1 microarrays to profile mRNAs, we identified IAR3 (IAA-Ala Resistant 3) as a novel target of miR167a. 2 organs X 3 treatments X 3 replicates This submission represnts ATH1 microarrays component of study.
Experiment type
transcription profiling by array 
Contacts
Cameron MacPherson, Hiroyuki Kasahara, Huan Wang, Jun Liu, Matthew A Hannahm, Nam-Hai Chua, Natsuko Kinoshita, Yasunori Machida, Yuji Kamiya
Citation
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-36789.idf.txt
Sample and data relationshipE-GEOD-36789.sdrf.txt
Raw data (1)E-GEOD-36789.raw.1.zip
Processed data (1)E-GEOD-36789.processed.1.zip
Array designA-AFFY-2.adf.txt
R ExpressionSetE-GEOD-36789.eSet.r
Links