E-GEOD-34899 - Autotoxicity mechanism of Oryza Sativa: Microarray analysis of rice plants in response to allelochemical ferulic acid

Status
Released on 22 July 2013, last updated on 2 June 2014
Organism
Oryza sativa
Samples (12)
Array (1)
Protocols (8)
Description
Autotoxicity plays an important mechanism in regulating plant productivity. Ferulic acid (FA) is phytotoxic and was identified in extracts and residues of rice plants as a candidate for rice allelochemicals. To help characterize the autotoxicity mechanism of rice, we present the first large-scale, transcriptomic analysis of rice root responses to ferulic acid. Two-condition experiment, short exposures and long exposures. Comparison of mock control and rice seedlings treated with 50 ppm ferulic acid (FA) during short (pooled from 1- and 3-h treatments), as compared to long (24 h) exposures.; Biological replicates: 3 control replicates (short and long exposures), 3 FA-treated replicates (short and long exposures).
Experiment type
transcription profiling by array 
Contacts
Wen-Chang Chi <wenji0918177774@yahoo.com.tw>, Chang-Hung Chou, Hao-Jen Huang, Yu-Chywan Hsiung, Yun-An Chen
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-34899.idf.txt
Sample and data relationshipE-GEOD-34899.sdrf.txt
Raw data (1)E-GEOD-34899.raw.1.zip
Processed data (1)E-GEOD-34899.processed.1.zip
Array designA-GEOD-8852.adf.txt
Links