E-GEOD-2504 - Transcription profiling of untreated, HIV-1 vector-infected and TNFalpha-treated human Jurkat T cells

Status
Submitted on 6 April 2005, released on 25 August 2007, last updated on 27 March 2012
Organism
Homo sapiens
Samples (9)
Array (1)
Description
Jurkat T cells (in triplicate per treatment group) were left untreated in culture, infected with VSV-G-pseudotyped HIV-based vector (which transduces Tat and eGFP) or treated with TNFalpha.
Experiment types
transcription profiling by array, co-expression, compound treatment, disease state
Contact
Citation
Genome-wide analysis of chromosomal features repressing human immunodeficiency virus transcription. M K Lewinski, D Bisgrove, P Shinn, H Chen, C Hoffmann, S Hannenhalli, E Verdin, C C Berry, J R Ecker, F D Bushman. J Virol 79(11):6610-9 (2005)
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-2504.idf.txt
Sample and data relationshipE-GEOD-2504.sdrf.txt
Processed data (1)E-GEOD-2504.processed.1.zip
Array designA-AFFY-33.adf.txt
Links