E-GEOD-24214 - Transcription profiling by array of Arabidopsis expressing mutant forms of beet curly-top virus L2 protein

Status
Released on 29 August 2011, last updated on 4 July 2013
Organism
Arabidopsis thaliana
Samples (9)
Array (1)
Protocols (17)
Description
affy_l2bctv_ath - affy_l2bctv_ath - Geminivirus diseases are among the most important economic impact on crops, including beans, cassava, cotton, cucurbits, corn, peppers and tomatoes. Geminiviruses have a genome composed of one or two molecules of single-stranded DNA, depending on mono or bipartite. The BCTV genome consists of a single strand of DNA that contains six reading frames for proteins CP, V2, Rep, C2, Ren, and C4. To determine the mechanism by which C2 of BCTV induce genes, we performed transgenic Arabidopsis expressing BCTV C2. We are interesting to study the difference between the wild type and two mutants. -10 days old plants were grown in MS at 24 degrees in long day. We used the different lines: wt, L2.4 mutants and L2.5 mutants. We performed three repetitions each. Keywords: gene knock in (transgenic) 9 arrays - ATH1
Experiment types
transcription profiling by array, genetic modification design
Contacts
stephanie huguet <huguet@evry.inra.fr>, Eduardo Rodriguez Bejarano, Marie-Laure Martin-Magniette, Sandrine Balzergue, Stephanie Huguet
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-24214.idf.txt
Sample and data relationshipE-GEOD-24214.sdrf.txt
Raw data (1)E-GEOD-24214.raw.1.zip
Processed data (1)E-GEOD-24214.processed.1.zip
Array designA-AFFY-2.adf.txt
Links