E-GEOD-22587 - Genome-wide microRNA analysis of NPC and non-NPC specimens gene expression

Status
Released on 25 June 2013, last updated on 2 June 2014
Organism
Homo sapiens
Samples (12)
Array (1)
Protocols (5)
Description
Analysis of differential expression between NPC and non-NPC tissues at miRNA expression level. We used a miRNA microarray platform to investigate the profile between NPC tissues and normal nasopharyngeal tissues to evaluate the relationship between miRNA expression and NPC. Recognition of the aberrant miRNAs and enrichment pathway analysis of predicted target gene may provide some clues to estimate the mechanism of miRNA effects on NPC carcinogenesis mediated by miRNA-mRNA regulation. Total RNA was extracted from 8 NPC tissues compared to 4 nasopharyngeal tissues. We peformed the Illumina miRNA microarray to identify the differentially expressed miRNA between NPC tissues and normal nasopharyngeal tissues.
Experiment type
transcription profiling by array 
Contacts
shu yang <yangshu_zfb@yahoo.cn>, Jia-xin CHEN, Ke-he CHEN, Shu YANG, Ting LI, Xu-ping FU, Yao LI, Zheng ZHANG
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-GEOD-22587.idf.txt
Sample and data relationshipE-GEOD-22587.sdrf.txt
Processed data (1)E-GEOD-22587.processed.1.zip
Array designA-GEOD-8933.adf.txt
Links